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I have run the LIGPLOT, but I keep getting error message: ''LIGPLOT failed I believe the provided instruction for installation is already crystal clear:.LIGPLOT Operating Manual. 2. How to run LIGPLOT. The script file that runs LIGPLOT assumes the following: That you have installed the HBPLUS program in LIGPLOT - automatically generates schematic diagrams of protein-ligand interactions for a given ligand in a PDB file. DIMPLOT - plots interactions across a LIGPLOT Operating Manual. 1. Introduction. These Operating Instructions describe how to run the LIGPLOT program (Wallace et al., 1995).