(.app) visualization of peptide and protein identification results from multip how install on 10.1

Main category: Education

Sub category: Science

Developer: CompOmics

Filesize: 113357

Title: PeptideShaker

v.1.16.39-PeptideShaker.dmg

FEATURE IMPROVEMENT: Replaced HelpWindow with HelpDialog, identical in every way but a JDialog instead of a JFrame, which makes the modal exclusion handling simpler. NEW FEATURE: Import of mzid files from other algorithms than MS-GF+. (beta) PeptideShaker provides users with a wealth of statistical and descriptive data, including the number of peptides, spectrum matches sequences and gene ontology enrichment analyzes. Where applicable, the application generates data-rich graphics in multiple forms, including bar charts and bubble plots. When cases allow it, individual strings are highlighted in different colors, allowing for quick comparisons between data sets. Download the latest version of the PRIDE Inspector Tool: Now, for the backup itself use Get Backup Pro. It’s more powerful than Apple’s own Time Machine. It’s also a good idea to create a bootable clone, so if anything goes wrong you can go back to where you started easily. Also, a cloned drive makes copying files back to your newly-updated system very easy. And move your images and documents into the cloud or to an external drive, just to be on the safe side. 38600

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BUG FIX: Fixed a bug in the mzIdentML file reader that resulted in only the first SpectrumIdentificationItem being loaded for each SpectrumIdentificationResult element.

Partial Submission means that a PX accession number will be assigned to your files but PRIDE experiment accession numbers won't be issued. Also, you won't have a DOI assigned to your dataset.

Changes in PeptideShaker 1.16.25 (June 15. 2018):

FEATURE IMPROVEMENT: The parsing of mgf (and mzml) files now support both upper and lower case file extensions.

NEW FEATURE: Added a new ID Rate column, and added a separate row for the total PeptideShaker results in the Spectrum IDs tab.

hydrogen_bondifier

FEATURE IMPROVEMENT: Spectra with out spectrum titles are now supported as input.

5) Load Rmpi package. Now it is ready to run MPI.

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